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  5. LOC_Os03g47820.1

LOC_Os03g47820.1


Description : Protein argonaute 12 OS=Oryza sativa subsp. japonica (sp|q7y001|ago12_orysj : 1757.0)


Gene families : OG0000124 (Archaeplastida) Phylogenetic Tree(s): OG0000124_tree ,
OG_05_0000677 (LandPlants) Phylogenetic Tree(s): OG_05_0000677_tree ,
OG_06_0000508 (SeedPlants) Phylogenetic Tree(s): OG_06_0000508_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g47820.1
Cluster HCCA: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
AT2G27880 AGO5 Argonaute family protein 0.03 Archaeplastida
Zm00001e025496_P001 No alias siRNA-integrating factor (AGO) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003100 PAZ_dom 408 531
IPR032473 Argonaute_Mid_dom 607 685
IPR003165 Piwi 704 1020
IPR014811 ArgoL1 351 401
IPR032474 Argonaute_N 204 335
IPR032472 ArgoL2 542 596
No external refs found!