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Description : IMB3 nucleocytoplasmic import karyopherin
Gene families : OG0002395 (Archaeplastida) Phylogenetic Tree(s): OG0002395_tree ,
OG_05_0002788 (LandPlants) Phylogenetic Tree(s): OG_05_0002788_tree ,
OG_06_0002611 (SeedPlants) Phylogenetic Tree(s): OG_06_0002611_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os03g49420.1 | |
| Cluster | HCCA: Cluster_188 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G19820 | emb2734 | ARM repeat superfamily protein | 0.06 | Archaeplastida | |
| MA_7851774g0010 | No alias | No annotation | 0.02 | Archaeplastida | |
| Zm00001e005369_P004 | No alias | IMB3 nucleocytoplasmic import karyopherin | 0.08 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Neighborhood |
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Neighborhood |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0004527 | exonuclease activity | IEP | Neighborhood |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Neighborhood |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0004813 | alanine-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006401 | RNA catabolic process | IEP | Neighborhood |
| BP | GO:0006402 | mRNA catabolic process | IEP | Neighborhood |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
| BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | Neighborhood |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006528 | asparagine metabolic process | IEP | Neighborhood |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009314 | response to radiation | IEP | Neighborhood |
| BP | GO:0009416 | response to light stimulus | IEP | Neighborhood |
| BP | GO:0009581 | detection of external stimulus | IEP | Neighborhood |
| BP | GO:0009582 | detection of abiotic stimulus | IEP | Neighborhood |
| BP | GO:0009583 | detection of light stimulus | IEP | Neighborhood |
| BP | GO:0009584 | detection of visible light | IEP | Neighborhood |
| BP | GO:0009605 | response to external stimulus | IEP | Neighborhood |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Neighborhood |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016874 | ligase activity | IEP | Neighborhood |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Neighborhood |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Neighborhood |
| BP | GO:0018298 | protein-chromophore linkage | IEP | Neighborhood |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Neighborhood |
| MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Neighborhood |
| BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Neighborhood |
| BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| BP | GO:0048519 | negative regulation of biological process | IEP | Neighborhood |
| BP | GO:0051606 | detection of stimulus | IEP | Neighborhood |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Neighborhood |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Neighborhood |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |