1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g49464.2

LOC_Os03g49464.2


Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana (sp|q9sit7|pp151_arath : 403.0)


Gene families : OG0021196 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0014073 (LandPlants) Phylogenetic Tree(s): OG_05_0014073_tree ,
OG_06_0013025 (SeedPlants) Phylogenetic Tree(s): OG_06_0013025_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g49464.2
Cluster HCCA: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
Zm00001e012231_P001 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007031 peroxisome organization IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 443 471
IPR002885 Pentatricopeptide_repeat 342 389
IPR002885 Pentatricopeptide_repeat 474 521
IPR002885 Pentatricopeptide_repeat 212 255
IPR002885 Pentatricopeptide_repeat 575 621
IPR002885 Pentatricopeptide_repeat 648 675
IPR002885 Pentatricopeptide_repeat 285 311
IPR002885 Pentatricopeptide_repeat 180 204
No external refs found!