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  5. LOC_Os03g49990.1

LOC_Os03g49990.1


Description : DELLA-type gibberellin signal transducer. transcription factor (GRAS). transcription factor (DELLA)


Gene families : OG0001710 (Archaeplastida) Phylogenetic Tree(s): OG0001710_tree ,
OG_05_0001098 (LandPlants) Phylogenetic Tree(s): OG_05_0001098_tree ,
OG_06_0001138 (SeedPlants) Phylogenetic Tree(s): OG_06_0001138_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g49990.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00140480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.03 Archaeplastida
AMTR_s00012p00140500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.03 Archaeplastida
AT1G14920 RGA2, GAI GRAS family transcription factor family protein 0.05 Archaeplastida
AT5G17490 RGL3 RGA-like protein 3 0.03 Archaeplastida
GSVIVT01011710001 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.02 Archaeplastida
GSVIVT01030735001 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.03 Archaeplastida
Mp5g20660.1 No alias DELLA-type gibberellin signal transducer. transcription... 0.03 Archaeplastida
Pp3c19_8310V3.1 No alias GRAS family transcription factor family protein 0.02 Archaeplastida
Smo122441 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.02 Archaeplastida
Smo139506 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.04 Archaeplastida
Zm00001e005412_P001 No alias DELLA-type gibberellin signal transducer. transcription... 0.06 Archaeplastida
Zm00001e012213_P001 No alias DELLA-type gibberellin signal transducer. transcription... 0.05 Archaeplastida
Zm00001e020330_P001 No alias DELLA-type gibberellin signal transducer. transcription... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR005202 TF_GRAS 241 621
IPR021914 TF_DELLA_N 39 113
No external refs found!