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  5. LOC_Os03g50300.1

LOC_Os03g50300.1


Description : golgin (CASP)


Gene families : OG0003849 (Archaeplastida) Phylogenetic Tree(s): OG0003849_tree ,
OG_05_0004723 (LandPlants) Phylogenetic Tree(s): OG_05_0004723_tree ,
OG_06_0007543 (SeedPlants) Phylogenetic Tree(s): OG_06_0007543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g50300.1
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AT3G18480 CASP, AtCASP CCAAT-displacement protein alternatively spliced product 0.03 Archaeplastida
Cre04.g223900 No alias No description available 0.04 Archaeplastida
Cre08.g382650 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.02 Archaeplastida
GSVIVT01008258001 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.04 Archaeplastida
Mp6g21020.1 No alias golgin (CASP) 0.05 Archaeplastida
Solyc06g069210.3.1 No alias golgin (CASP) 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006891 intra-Golgi vesicle-mediated transport IEA Interproscan
CC GO:0030173 integral component of Golgi membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
CC GO:0005801 cis-Golgi network IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006906 vesicle fusion IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016050 vesicle organization IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Neighborhood
BP GO:0048284 organelle fusion IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0061025 membrane fusion IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0090174 organelle membrane fusion IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR012955 CASP_C 417 642
No external refs found!