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  5. LOC_Os03g50780.1

LOC_Os03g50780.1


Description : MMD1/DUET meiotic recombination regulating protein. PHD finger transcription factor


Gene families : OG0000911 (Archaeplastida) Phylogenetic Tree(s): OG0000911_tree ,
OG_05_0000834 (LandPlants) Phylogenetic Tree(s): OG_05_0000834_tree ,
OG_06_0001753 (SeedPlants) Phylogenetic Tree(s): OG_06_0001753_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g50780.1
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00102300 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.03 Archaeplastida
Zm00001e012165_P001 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 640 685
No external refs found!