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  5. LOC_Os03g51620.1

LOC_Os03g51620.1


Description : calcium-permeable channel (OSCA)


Gene families : OG0000175 (Archaeplastida) Phylogenetic Tree(s): OG0000175_tree ,
OG_05_0001215 (LandPlants) Phylogenetic Tree(s): OG_05_0001215_tree ,
OG_06_0001435 (SeedPlants) Phylogenetic Tree(s): OG_06_0001435_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g51620.1
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AT3G21620 No alias ERD (early-responsive to dehydration stress) family protein 0.04 Archaeplastida
AT3G54510 No alias Early-responsive to dehydration stress protein (ERD4) 0.03 Archaeplastida
AT4G02900 No alias ERD (early-responsive to dehydration stress) family protein 0.01 Archaeplastida
Cre08.g360500 No alias CSC1-like protein At1g62320 OS=Arabidopsis thaliana 0.01 Archaeplastida
Gb_08557 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
MA_317011g0010 No alias CSC1-like protein HYP1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c11_15540V3.1 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 Archaeplastida
Zm00001e011518_P001 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
Zm00001e012117_P001 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
Zm00001e031717_P002 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
CC GO:0005664 nuclear origin of replication recognition complex IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
InterPro domains Description Start Stop
IPR032880 Csc1_N 6 166
IPR027815 PHM7_cyt 187 344
IPR003864 RSN1_7TM 355 621
No external refs found!