Description : component GRF of GRF-GIF transcriptional complex
Gene families : OG0000341 (Archaeplastida) Phylogenetic Tree(s): OG0000341_tree ,
OG_05_0000223 (LandPlants) Phylogenetic Tree(s): OG_05_0000223_tree ,
OG_06_0005277 (SeedPlants) Phylogenetic Tree(s): OG_06_0005277_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os03g51970.1 | |
Cluster | HCCA: Cluster_357 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00040p00189460 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.03 | Archaeplastida | |
AMTR_s00048p00216350 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.07 | Archaeplastida | |
AMTR_s00065p00092420 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.05 | Archaeplastida | |
AT2G36400 | GRF3, AtGRF3 | growth-regulating factor 3 | 0.03 | Archaeplastida | |
AT3G13960 | GRF5, AtGRF5 | growth-regulating factor 5 | 0.02 | Archaeplastida | |
AT4G37740 | GRF2, AtGRF2 | growth-regulating factor 2 | 0.03 | Archaeplastida | |
GSVIVT01009299001 | No alias | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.02 | Archaeplastida | |
GSVIVT01024326001 | No alias | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.04 | Archaeplastida | |
Gb_19288 | No alias | component GRF of GRF-GIF transcriptional complex | 0.03 | Archaeplastida | |
Gb_20400 | No alias | component GRF of GRF-GIF transcriptional complex | 0.02 | Archaeplastida | |
LOC_Os02g45570.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.05 | Archaeplastida | |
MA_111469g0010 | No alias | component GRF of GRF-GIF transcriptional complex | 0.03 | Archaeplastida | |
MA_18836g0010 | No alias | component GRF of GRF-GIF transcriptional complex | 0.04 | Archaeplastida | |
MA_33661g0010 | No alias | component GRF of GRF-GIF transcriptional complex | 0.04 | Archaeplastida | |
Mp8g16900.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.05 | Archaeplastida | |
Pp3c12_3720V3.1 | No alias | growth-regulating factor 2 | 0.03 | Archaeplastida | |
Smo442384 | No alias | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.03 | Archaeplastida | |
Solyc04g077510.4.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Solyc07g041640.3.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.03 | Archaeplastida | |
Zm00001e005165_P002 | No alias | component GRF of GRF-GIF transcriptional complex | 0.03 | Archaeplastida | |
Zm00001e005558_P001 | No alias | component GRF of GRF-GIF transcriptional complex | 0.02 | Archaeplastida | |
Zm00001e012291_P001 | No alias | Growth-regulating factor 9 OS=Oryza sativa subsp.... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005507 | copper ion binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
BP | GO:0006260 | DNA replication | IEP | Neighborhood |
BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
BP | GO:0006479 | protein methylation | IEP | Neighborhood |
BP | GO:0006952 | defense response | IEP | Neighborhood |
MF | GO:0008170 | N-methyltransferase activity | IEP | Neighborhood |
BP | GO:0008213 | protein alkylation | IEP | Neighborhood |
MF | GO:0008276 | protein methyltransferase activity | IEP | Neighborhood |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Neighborhood |
MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Neighborhood |
MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Neighborhood |
MF | GO:0016409 | palmitoyltransferase activity | IEP | Neighborhood |
BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
BP | GO:0016570 | histone modification | IEP | Neighborhood |
BP | GO:0016571 | histone methylation | IEP | Neighborhood |
MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Neighborhood |
MF | GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | IEP | Neighborhood |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | Neighborhood |
MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Neighborhood |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | Neighborhood |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Neighborhood |
BP | GO:0032259 | methylation | IEP | Neighborhood |
BP | GO:0034968 | histone lysine methylation | IEP | Neighborhood |
MF | GO:0042054 | histone methyltransferase activity | IEP | Neighborhood |
BP | GO:0043414 | macromolecule methylation | IEP | Neighborhood |
No external refs found! |