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  5. LOC_Os03g53220.1

LOC_Os03g53220.1


Description : RNA helicase (Brr2)


Gene families : OG0000989 (Archaeplastida) Phylogenetic Tree(s): OG0000989_tree ,
OG_05_0001451 (LandPlants) Phylogenetic Tree(s): OG_05_0001451_tree ,
OG_06_0001729 (SeedPlants) Phylogenetic Tree(s): OG_06_0001729_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g53220.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
MA_10429486g0010 No alias DExH-box ATP-dependent RNA helicase DExH14... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
InterPro domains Description Start Stop
IPR004179 Sec63-dom 986 1288
IPR011545 DEAD/DEAH_box_helicase_dom 1333 1500
IPR011545 DEAD/DEAH_box_helicase_dom 513 626
IPR004179 Sec63-dom 1819 2134
No external refs found!