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LOC_Os03g53510.2


Description : Autophagy-related protein 16 OS=Arabidopsis thaliana (sp|q6nnp0|atg16_arath : 503.0)


Gene families : OG0005952 (Archaeplastida) Phylogenetic Tree(s): OG0005952_tree ,
OG_05_0006407 (LandPlants) Phylogenetic Tree(s): OG_05_0006407_tree ,
OG_06_0008514 (SeedPlants) Phylogenetic Tree(s): OG_06_0008514_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g53510.2
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01007587001 No alias Autophagy-related protein 16 OS=Arabidopsis thaliana 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008237 metallopeptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 302 341
IPR001680 WD40_repeat 448 468
IPR001680 WD40_repeat 220 256
IPR001680 WD40_repeat 364 381
IPR013923 Autophagy-rel_prot_16 42 168
No external refs found!