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  5. LOC_Os03g53780.1

LOC_Os03g53780.1


Description : Putative ammonium transporter 4 member 1 OS=Oryza sativa subsp. japonica (sp|q10cv4|amt41_orysj : 495.0)


Gene families : OG0000634 (Archaeplastida) Phylogenetic Tree(s): OG0000634_tree ,
OG_05_0080210 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0069057 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g53780.1
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01021796001 No alias Solute transport.channels.AMT family.ammonium... 0.04 Archaeplastida
Mp4g12460.1 No alias ammonium transporter (AMT2/3) 0.02 Archaeplastida
Mp8g18510.1 No alias ammonium transporter (AMT2/3) 0.02 Archaeplastida
Solyc09g065740.2.1 No alias ammonium transporter (AMT2/3) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEA Interproscan
BP GO:0015696 ammonium transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
InterPro domains Description Start Stop
IPR024041 NH4_transpt_AmtB-like_dom 150 241
IPR024041 NH4_transpt_AmtB-like_dom 43 141
No external refs found!