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  5. LOC_Os03g54910.1

LOC_Os03g54910.1


Description : PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana (sp|q9fz86|pdcb3_arath : 115.0)


Gene families : OG0000145 (Archaeplastida) Phylogenetic Tree(s): OG0000145_tree ,
OG_05_0000072 (LandPlants) Phylogenetic Tree(s): OG_05_0000072_tree ,
OG_06_0000086 (SeedPlants) Phylogenetic Tree(s): OG_06_0000086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g54910.1
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00163410 evm_27.TU.AmTr_v1... PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00045p00081920 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 Archaeplastida
AMTR_s00086p00121550 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G18650 PDCB3 plasmodesmata callose-binding protein 3 0.05 Archaeplastida
AT2G03505 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 Archaeplastida
AT2G04910 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 Archaeplastida
AT5G08000 PDCB2, E13L3 glucan endo-1,3-beta-glucosidase-like protein 3 0.09 Archaeplastida
AT5G35740 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 Archaeplastida
GSVIVT01021412001 No alias Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum 0.03 Archaeplastida
GSVIVT01021583001 No alias Pentatricopeptide repeat-containing protein At2g17525,... 0.02 Archaeplastida
GSVIVT01030060001 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_00481 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.04 Archaeplastida
Gb_02732 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 Archaeplastida
Gb_10965 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.05 Archaeplastida
Gb_15821 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os01g14140.1 No alias Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.03 Archaeplastida
LOC_Os02g29980.1 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os07g40940.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 Archaeplastida
MA_210389g0010 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.07 Archaeplastida
MA_5039622g0010 No alias No annotation 0.02 Archaeplastida
MA_939354g0010 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c21_14040V3.1 No alias O-Glycosyl hydrolases family 17 protein 0.05 Archaeplastida
Solyc02g071200.4.1 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 Archaeplastida
Solyc05g016390.4.1 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.04 Archaeplastida
Solyc09g091920.3.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 Archaeplastida
Solyc12g017360.3.1 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.04 Archaeplastida
Solyc12g098410.2.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e005720_P001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.08 Archaeplastida
Zm00001e020392_P001 No alias Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e021782_P001 No alias Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.03 Archaeplastida
Zm00001e022608_P001 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e027936_P001 No alias Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e032121_P001 No alias Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012946 X8 26 96
No external refs found!