LOC_Os03g55080.1

Description : transcription factor (WRKY)

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000005 (LandPlants) Phylogenetic Tree(s): OG_05_0000005_tree ,
OG_06_0000033 (SeedPlants) Phylogenetic Tree(s): OG_06_0000033_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g55080.1
Cluster	HCCA: Cluster_291

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00229970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
AMTR_s00013p00160270	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00015p00181570	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00015p00228580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.06	Archaeplastida
AMTR_s00015p00229650	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
AMTR_s00023p00102530	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
AMTR_s00045p00128140	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00053p00025460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00058p00090300	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00065p00201230	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00077p00103580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.06	Archaeplastida
AT1G18860	WRKY61, ATWRKY61	WRKY DNA-binding protein 61	0.04	Archaeplastida
AT1G62300	WRKY6, ATWRKY6	WRKY family transcription factor	0.02	Archaeplastida
AT1G66550	WRKY67, ATWRKY67	WRKY DNA-binding protein 67	0.03	Archaeplastida
AT1G80840	ATWRKY40, WRKY40	WRKY DNA-binding protein 40	0.06	Archaeplastida
AT2G23320	WRKY15	WRKY DNA-binding protein 15	0.04	Archaeplastida
AT2G25000	ATWRKY60, WRKY60	WRKY DNA-binding protein 60	0.02	Archaeplastida
AT2G40740	WRKY55, ATWRKY55	WRKY DNA-binding protein 55	0.03	Archaeplastida
AT2G44745	No alias	WRKY family transcription factor	0.04	Archaeplastida
AT3G58710	ATWRKY69, WRKY69	WRKY DNA-binding protein 69	0.03	Archaeplastida
AT4G01250	WRKY22, AtWRKY22	WRKY family transcription factor	0.05	Archaeplastida
AT4G04450	WRKY42, AtWRKY42	WRKY family transcription factor	0.03	Archaeplastida
AT4G18170	WRKY28, ATWRKY28	WRKY DNA-binding protein 28	0.02	Archaeplastida
AT4G23550	ATWRKY29, WRKY29	WRKY family transcription factor	0.03	Archaeplastida
AT4G23810	WRKY53, ATWRKY53	WRKY family transcription factor	0.05	Archaeplastida
AT4G31550	ATWRKY11, WRKY11	WRKY DNA-binding protein 11	0.06	Archaeplastida
AT5G24110	ATWRKY30, WRKY30	WRKY DNA-binding protein 30	0.04	Archaeplastida
AT5G41570	ATWRKY24, WRKY24	WRKY DNA-binding protein 24	0.02	Archaeplastida
AT5G49520	WRKY48, ATWRKY48	WRKY DNA-binding protein 48	0.04	Archaeplastida
GSVIVT01012682001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01015952001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01019419001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01019511001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01021252001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01022245001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01024624001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01026965001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01027069001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01028147001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01028244001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01028718001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01029265001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01030258001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01030453001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01032661001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.05	Archaeplastida
GSVIVT01032662001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.06	Archaeplastida
GSVIVT01034968001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01035885001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
Gb_01873	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Gb_07810	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Gb_12538	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Gb_23334	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Gb_25547	No alias	transcription factor (WRKY)	0.07	Archaeplastida
Gb_26413	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Gb_39366	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Gb_40261	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g18584.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g43550.1	No alias	transcription factor (WRKY)	0.06	Archaeplastida
LOC_Os01g47560.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g53040.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g60490.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os01g61080.1	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.03	Archaeplastida
LOC_Os02g08440.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os02g16540.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os03g20550.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os03g58420.1	No alias	transcription factor (WRKY)	0.05	Archaeplastida
LOC_Os05g27730.1	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.03	Archaeplastida
LOC_Os05g45230.1	No alias	transcription factor (WRKY)	0.06	Archaeplastida
LOC_Os06g06360.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os06g44010.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os07g48260.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os08g29660.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os10g42850.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os12g02420.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_103616g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_10429098g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10434450g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_10434651g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_10434976g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_10436051g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_114377g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_124797g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_175750g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_2121641g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_2290g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_2535g0020	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_310991g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_381058g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_49848g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_53351g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_6177g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_76002g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Mp1g08960.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Mp3g00010.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Mp6g16800.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Mp7g06550.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Mp7g17200.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Mp8g10640.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Pp3c12_4260V3.1	No alias	WRKY family transcription factor	0.04	Archaeplastida
Pp3c13_10830V3.1	No alias	WRKY family transcription factor	0.02	Archaeplastida
Pp3c14_17020V3.1	No alias	WRKY DNA-binding protein 7	0.02	Archaeplastida
Pp3c2_32150V3.1	No alias	WRKY DNA-binding protein 4	0.02	Archaeplastida
Pp3c3_8830V3.1	No alias	WRKY DNA-binding protein 23	0.04	Archaeplastida
Pp3c4_15559V3.1	No alias	WRKY family transcription factor	0.02	Archaeplastida
Smo66769	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
Solyc01g095100.4.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc03g095770.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc03g116890.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc04g078550.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc06g068460.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc07g066220.3.1	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Solyc08g006320.4.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc08g008280.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc09g014990.4.1	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.02	Archaeplastida
Solyc12g042590.2.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc12g056750.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc12g096350.2.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e001512_P003	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e002033_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e005219_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e005732_P002	No alias	transcription factor (WRKY)	0.09	Archaeplastida
Zm00001e008447_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e011098_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e013838_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e016343_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e016622_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e017439_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e018502_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e019827_P003	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e019908_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e020279_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e020417_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e021431_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e023305_P002	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e025096_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e025758_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e025935_P001	No alias	transcription factor (WRKY)	0.06	Archaeplastida
Zm00001e025937_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e026828_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e027140_P002	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.04	Archaeplastida
Zm00001e027460_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e027804_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e028832_P001	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.03	Archaeplastida
Zm00001e029092_P002	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e030443_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e031518_P004	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.05	Archaeplastida
Zm00001e032260_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e033862_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Neighborhood
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
BP	GO:0016567	protein ubiquitination	IEP	Neighborhood
MF	GO:0016859	cis-trans isomerase activity	IEP	Neighborhood
BP	GO:0018193	peptidyl-amino acid modification	IEP	Neighborhood
BP	GO:0018208	peptidyl-proline modification	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
BP	GO:0032446	protein modification by small protein conjugation	IEP	Neighborhood
MF	GO:0050661	NADP binding	IEP	Neighborhood
MF	GO:0051287	NAD binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	135	191

External Links

No external refs found!

LOC_Os03g55080.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation