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  5. LOC_Os03g55100.1

LOC_Os03g55100.1


Description : cyclic nucleotide-gated cation channel (CNGC). temperature sensor protein (CNGC2)


Gene families : OG0000137 (Archaeplastida) Phylogenetic Tree(s): OG0000137_tree ,
OG_05_0001872 (LandPlants) Phylogenetic Tree(s): OG_05_0001872_tree ,
OG_06_0005176 (SeedPlants) Phylogenetic Tree(s): OG_06_0005176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g55100.1
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AT1G01340 ATCNGC10, CNGC10, ACBK1 cyclic nucleotide gated channel 10 0.03 Archaeplastida
Cre01.g053700 No alias Potassium channel SKOR OS=Arabidopsis thaliana 0.01 Archaeplastida
Gb_31623 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida
MA_212367g0010 No alias Putative cyclic nucleotide-gated ion channel 19... 0.03 Archaeplastida
Pp3c15_7250V3.1 No alias cyclic nucleotide-gated cation channel 4 0.03 Archaeplastida
Pp3c2_11890V3.1 No alias cyclic nucleotide gated channel 9 0.03 Archaeplastida
Solyc03g098210.4.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Archaeplastida
Solyc05g050350.2.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida
Zm00001e015160_P001 No alias cyclic nucleotide-gated cation channel (CNGC) 0.04 Archaeplastida
Zm00001e032059_P001 No alias cyclic nucleotide-gated cation channel (CNGC) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009092 homoserine metabolic process IEP Neighborhood
BP GO:0019346 transsulfuration IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0050667 homocysteine metabolic process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 128 451
IPR000595 cNMP-bd_dom 553 644
No external refs found!