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  5. LOC_Os03g55570.1

LOC_Os03g55570.1


Description : no hits & (original description: none)


Gene families : OG0000513 (Archaeplastida) Phylogenetic Tree(s): OG0000513_tree ,
OG_05_0001784 (LandPlants) Phylogenetic Tree(s): OG_05_0001784_tree ,
OG_06_0001864 (SeedPlants) Phylogenetic Tree(s): OG_06_0001864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g55570.1
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001065.38 No alias No description available 0.02 Archaeplastida
GSVIVT01003333001 No alias No description available 0.03 Archaeplastida
GSVIVT01003552001 No alias No description available 0.03 Archaeplastida
Zm00001e011981_P002 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
CC GO:0005779 integral component of peroxisomal membrane IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007031 peroxisome organization IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003121 SWIB_MDM2_domain 257 330
IPR003121 SWIB_MDM2_domain 137 209
IPR014876 DEK_C 2 55
No external refs found!