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  5. LOC_Os03g55850.1

LOC_Os03g55850.1


Description : Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana (sp|q9svl6|crpm2_arath : 204.0)


Gene families : OG0004056 (Archaeplastida) Phylogenetic Tree(s): OG0004056_tree ,
OG_05_0002949 (LandPlants) Phylogenetic Tree(s): OG_05_0002949_tree ,
OG_06_0003780 (SeedPlants) Phylogenetic Tree(s): OG_06_0003780_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g55850.1
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AT2G15970 WCOR413-LIKE,... cold regulated 413 plasma membrane 1 0.05 Archaeplastida
GSVIVT01019037001 No alias No description available 0.03 Archaeplastida
Mp7g18950.1 No alias Cold-regulated 413 plasma membrane protein 2... 0.02 Archaeplastida
Pp3c3_23240V3.1 No alias cold-regulated 413-plasma membrane 2 0.02 Archaeplastida
Solyc01g109170.3.1 No alias Cold-regulated 413 plasma membrane protein 2... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004618 phosphoglycerate kinase activity IEP Neighborhood
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006090 pyruvate metabolic process IEP Neighborhood
BP GO:0006096 glycolytic process IEP Neighborhood
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006757 ATP generation from ADP IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009132 nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009165 nucleotide biosynthetic process IEP Neighborhood
BP GO:0009166 nucleotide catabolic process IEP Neighborhood
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Neighborhood
MF GO:0016778 diphosphotransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Neighborhood
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0042866 pyruvate biosynthetic process IEP Neighborhood
BP GO:0046031 ADP metabolic process IEP Neighborhood
BP GO:0046939 nucleotide phosphorylation IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
BP GO:1901292 nucleoside phosphate catabolic process IEP Neighborhood
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR008892 COR413 20 197
No external refs found!