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  5. LOC_Os03g57240.1

LOC_Os03g57240.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0005640 (SeedPlants) Phylogenetic Tree(s): OG_06_0005640_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g57240.1
Cluster HCCA: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00169240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.08 Archaeplastida
AMTR_s00124p00105750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00150p00049910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G13400 JGL, NUB C2H2 and C2HC zinc fingers superfamily protein 0.04 Archaeplastida
AT1G80730 ZFP1, ATZFP1 zinc-finger protein 1 0.02 Archaeplastida
AT3G09290 TAC1 telomerase activator1 0.02 Archaeplastida
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.02 Archaeplastida
GSVIVT01016493001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
GSVIVT01031007001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
MA_10430024g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_123573g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_424g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc04g014540.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc05g006310.3.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Solyc05g009180.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc10g080600.3.1 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
Zm00001e000996_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e005916_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e008019_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e011910_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e012453_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e016020_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e016256_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e017991_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e022212_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e034219_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034220_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034221_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e037946_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e038617_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e040612_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e040940_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!