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  5. LOC_Os03g57430.1

LOC_Os03g57430.1


Description : NUP1/NUP136 nucleoporin of nuclear pore complex


Gene families : OG0004043 (Archaeplastida) Phylogenetic Tree(s): OG0004043_tree ,
OG_05_0003103 (LandPlants) Phylogenetic Tree(s): OG_05_0003103_tree ,
OG_06_0017083 (SeedPlants) Phylogenetic Tree(s): OG_06_0017083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g57430.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00164270 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.03 Archaeplastida
AT3G10650 No alias BEST Arabidopsis thaliana protein match is:... 0.03 Archaeplastida
GSVIVT01034601001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 Archaeplastida
Gb_18080 No alias NUP1/NUP136 nucleoporin of nuclear pore complex 0.06 Archaeplastida
MA_101453g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_87384g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g006390.2.1 No alias NUP1/NUP136 nucleoporin of nuclear pore complex 0.03 Archaeplastida
Zm00001e005928_P001 No alias NUP1/NUP136 nucleoporin of nuclear pore complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!