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  5. LOC_Os03g57790.1

LOC_Os03g57790.1


Description : ubiquitin-conjugating E2 protein


Gene families : OG0000900 (Archaeplastida) Phylogenetic Tree(s): OG0000900_tree ,
OG_05_0002020 (LandPlants) Phylogenetic Tree(s): OG_05_0002020_tree ,
OG_06_0002099 (SeedPlants) Phylogenetic Tree(s): OG_06_0002099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g57790.1
Cluster HCCA: Cluster_354

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00126660 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G14400 ATUBC1, UBC1 ubiquitin carrier protein 1 0.03 Archaeplastida
AT2G02760 ATUBC2, UBC2 ubiquiting-conjugating enzyme 2 0.03 Archaeplastida
Cpa|evm.model.tig00000737.3 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Cre06.g294850 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01020056001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.08 Archaeplastida
GSVIVT01022467001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.07 Archaeplastida
Gb_26842 No alias ubiquitin-conjugating E2 protein 0.02 Archaeplastida
MA_16089g0010 No alias ubiquitin-conjugating E2 protein 0.02 Archaeplastida
Mp2g13120.1 No alias Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum... 0.03 Archaeplastida
Mp8g17960.1 No alias ubiquitin-conjugating E2 protein 0.02 Archaeplastida
Pp3c12_9550V3.1 No alias ubiquiting-conjugating enzyme 2 0.03 Archaeplastida
Solyc03g113100.3.1 No alias ubiquitin-conjugating E2 protein 0.03 Archaeplastida
Solyc06g070980.3.1 No alias ubiquitin-conjugating E2 protein 0.07 Archaeplastida
Zm00001e011885_P001 No alias ubiquitin-conjugating E2 protein 0.05 Archaeplastida
Zm00001e032886_P001 No alias ubiquitin-conjugating E2 protein 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 8 144
No external refs found!