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  5. LOC_Os03g58330.1

LOC_Os03g58330.1


Description : transcription factor (bHLH)


Gene families : OG0000051 (Archaeplastida) Phylogenetic Tree(s): OG0000051_tree ,
OG_05_0000521 (LandPlants) Phylogenetic Tree(s): OG_05_0000521_tree ,
OG_06_0000874 (SeedPlants) Phylogenetic Tree(s): OG_06_0000874_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g58330.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00027110 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.03 Archaeplastida
GSVIVT01004930001 No alias External stimuli response.light.UV-A/blue... 0.02 Archaeplastida
GSVIVT01008628001 No alias External stimuli response.light.UV-A/blue... 0.02 Archaeplastida
GSVIVT01021787001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01032055001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
LOC_Os02g39140.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os03g12940.1 No alias transcription factor (bHLH). component FBX of SCF E3... 0.04 Archaeplastida
LOC_Os09g33580.2 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
MA_105921g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
MA_9115341g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.01 Archaeplastida
Pp3c15_4760V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Archaeplastida
Pp3c19_11400V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Archaeplastida
Pp3c2_2660V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c5_18850V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Smo24892 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Solyc03g113560.4.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc04g077480.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Solyc12g010170.2.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e010138_P002 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Zm00001e030754_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e034528_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e034658_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 144 188
No external refs found!