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  5. LOC_Os03g58990.1

LOC_Os03g58990.1


Description : Germin-like protein 3-8 OS=Oryza sativa subsp. japonica (sp|q75hj4|gl38_orysj : 164.0)


Gene families : OG0000034 (Archaeplastida) Phylogenetic Tree(s): OG0000034_tree ,
OG_05_0000016 (LandPlants) Phylogenetic Tree(s): OG_05_0000016_tree ,
OG_06_0013727 (SeedPlants) Phylogenetic Tree(s): OG_06_0013727_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g58990.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00241260 evm_27.TU.AmTr_v1... Germin-like protein 3-7 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00067p00014150 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00074p00061830 evm_27.TU.AmTr_v1... Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00089p00119070 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00114p00037920 evm_27.TU.AmTr_v1... Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00794p00001640 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AT3G62020 GLP10 germin-like protein 10 0.03 Archaeplastida
GSVIVT01000069001 No alias Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01000070001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020142001 No alias Germin-like protein 3-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
GSVIVT01021700001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
GSVIVT01021705001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
GSVIVT01028222001 No alias Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01030965001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
GSVIVT01031085001 No alias Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_00713 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.04 Archaeplastida
Gb_07519 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_17046 No alias Auxin-binding protein ABP19a OS=Prunus persica... 0.02 Archaeplastida
Gb_17655 No alias Germin-like protein 3-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_27049 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Gb_30305 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os08g09000.1 No alias Germin-like protein 8-6 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g09020.1 No alias Germin-like protein 8-9 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g09040.1 No alias Germin-like protein 8-9 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g35760.1 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_10345692g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_3366g0010 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.03 Archaeplastida
MA_42727g0010 No alias Germin-like protein 3-1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_43266g0010 No alias Germin-like protein 8-4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_740063g0010 No alias Germin-like protein subfamily 1 member 1 OS=Arabidopsis... 0.02 Archaeplastida
MA_7641850g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_926447g0010 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp2g01630.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Mp4g12600.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Mp5g02540.1 No alias Germin-like protein 3-3 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Mp5g23430.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Mp5g23510.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Mp6g03890.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.02 Archaeplastida
Mp8g18120.1 No alias Putative germin-like protein 3-2 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Pp3c23_1379V3.1 No alias germin-like protein 5 0.03 Archaeplastida
Pp3c23_1420V3.1 No alias germin-like protein 5 0.04 Archaeplastida
Smo227294 No alias Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Solyc01g102895.1.1 No alias Germin-like protein subfamily 1 member 13 OS=Arabidopsis... 0.04 Archaeplastida
Solyc11g006980.1.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e006055_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e013714_P001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e017425_P001 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e021636_P002 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e021637_P001 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e025458_P001 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e039952_P001 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006045 Cupin_1 93 142
IPR006045 Cupin_1 38 90
No external refs found!