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  5. LOC_Os03g59040.1

LOC_Os03g59040.1


Description : squalene synthase


Gene families : OG0003623 (Archaeplastida) Phylogenetic Tree(s): OG0003623_tree ,
OG_05_0003611 (LandPlants) Phylogenetic Tree(s): OG_05_0003611_tree ,
OG_06_0003756 (SeedPlants) Phylogenetic Tree(s): OG_06_0003756_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g59040.1
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
Pp3c3_33160V3.1 No alias squalene synthase 1 0.02 Archaeplastida
Smo96714 No alias Secondary metabolism.terpenoids.terpenoid... 0.03 Archaeplastida
Solyc01g110290.3.1 No alias squalene synthase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!