LOC_Os03g59340.1

Description : catalytic component CesA of cellulose synthase complex

Gene families : OG0000303 (Archaeplastida) Phylogenetic Tree(s): OG0000303_tree ,
OG_05_0000193 (LandPlants) Phylogenetic Tree(s): OG_05_0000193_tree ,
OG_06_0000126 (SeedPlants) Phylogenetic Tree(s): OG_06_0000126_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g59340.1
Cluster	HCCA: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00086120	evm_27.TU.AmTr_v1...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	Archaeplastida
AMTR_s00081p00171100	evm_27.TU.AmTr_v1...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.06	Archaeplastida
AMTR_s00103p00124340	evm_27.TU.AmTr_v1...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.07	Archaeplastida
AT4G32410	AtCESA1, RSW1, CESA1	cellulose synthase 1	0.03	Archaeplastida
AT4G39350	ATH-A, CESA2, ATCESA2	cellulose synthase A2	0.03	Archaeplastida
AT5G05170	IXR1, CEV1,...	Cellulose synthase family protein	0.05	Archaeplastida
AT5G64740	CESA6, PRC1, IXR2, E112	cellulose synthase 6	0.03	Archaeplastida
GSVIVT01013471001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.04	Archaeplastida
GSVIVT01021248001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	Archaeplastida
GSVIVT01023643001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	Archaeplastida
GSVIVT01028402001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	Archaeplastida
GSVIVT01032096001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.05	Archaeplastida
GSVIVT01033297001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.04	Archaeplastida
GSVIVT01034552001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	Archaeplastida
GSVIVT01035830001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.05	Archaeplastida
Gb_05828	No alias	catalytic component CesA of cellulose synthase complex	0.09	Archaeplastida
Gb_07444	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Gb_25795	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
Gb_32651	No alias	catalytic component CesA of cellulose synthase complex	0.06	Archaeplastida
LOC_Os05g08370.1	No alias	catalytic component CesA of cellulose synthase complex	0.04	Archaeplastida
MA_102060g0010	No alias	catalytic component CesA of cellulose synthase complex	0.05	Archaeplastida
MA_10429177g0010	No alias	catalytic component CesA of cellulose synthase complex	0.08	Archaeplastida
MA_140410g0010	No alias	catalytic component CesA of cellulose synthase complex	0.08	Archaeplastida
Mp7g07800.1	No alias	catalytic component CesA of cellulose synthase complex	0.05	Archaeplastida
Pp3c15_7150V3.1	No alias	cellulose synthase 1	0.04	Archaeplastida
Pp3c2_13330V3.1	No alias	Cellulose synthase family protein	0.07	Archaeplastida
Pp3c3_34520V3.1	No alias	Cellulose synthase family protein	0.02	Archaeplastida
Pp3c9_2550V3.1	No alias	cellulose synthase 1	0.06	Archaeplastida
Pp3c9_2670V3.1	No alias	Cellulose synthase family protein	0.03	Archaeplastida
Smo141535	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.04	Archaeplastida
Smo163575	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.04	Archaeplastida
Smo73698	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	Archaeplastida
Smo75715	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	Archaeplastida
Solyc01g087210.3.1	No alias	catalytic component CesA of cellulose synthase complex	0.05	Archaeplastida
Solyc04g071650.4.1	No alias	catalytic component CesA of cellulose synthase complex	0.06	Archaeplastida
Solyc07g005840.2.1	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Solyc08g061100.3.1	No alias	catalytic component CesA of cellulose synthase complex	0.05	Archaeplastida
Solyc12g056580.2.1	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Zm00001e006094_P004	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Zm00001e009406_P001	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
Zm00001e009592_P002	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Zm00001e026711_P001	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Zm00001e031187_P001	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Zm00001e033093_P003	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Zm00001e033375_P001	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	Neighborhood
MF	GO:0003924	GTPase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006694	steroid biosynthetic process	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0007010	cytoskeleton organization	IEP	Neighborhood
MF	GO:0008017	microtubule binding	IEP	Neighborhood
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	Neighborhood
MF	GO:0008092	cytoskeletal protein binding	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0008202	steroid metabolic process	IEP	Neighborhood
MF	GO:0015631	tubulin binding	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
MF	GO:0016229	steroid dehydrogenase activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016409	palmitoyltransferase activity	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0017016	Ras GTPase binding	IEP	Neighborhood
MF	GO:0017048	Rho GTPase binding	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
BP	GO:0030832	regulation of actin filament length	IEP	Neighborhood
BP	GO:0030833	regulation of actin filament polymerization	IEP	Neighborhood
MF	GO:0031267	small GTPase binding	IEP	Neighborhood
BP	GO:0032271	regulation of protein polymerization	IEP	Neighborhood
BP	GO:0032535	regulation of cellular component size	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	Neighborhood
BP	GO:0032970	regulation of actin filament-based process	IEP	Neighborhood
BP	GO:0033043	regulation of organelle organization	IEP	Neighborhood
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
BP	GO:0043254	regulation of protein complex assembly	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
MF	GO:0048365	Rac GTPase binding	IEP	Neighborhood
MF	GO:0051011	microtubule minus-end binding	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood
BP	GO:0051128	regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Neighborhood
BP	GO:0090066	regulation of anatomical structure size	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
BP	GO:0110053	regulation of actin filament organization	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR027934	CES_Znf_RING	10	78
IPR005150	Cellulose_synth	348	1067

External Links

No external refs found!

LOC_Os03g59340.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation