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  5. LOC_Os03g61970.1

LOC_Os03g61970.1


Description : actin filament protein


Gene families : OG0000334 (Archaeplastida) Phylogenetic Tree(s): OG0000334_tree ,
OG_05_0000214 (LandPlants) Phylogenetic Tree(s): OG_05_0000214_tree ,
OG_06_0000153 (SeedPlants) Phylogenetic Tree(s): OG_06_0000153_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g61970.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00088410 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin filament protein 0.04 Archaeplastida
AMTR_s00062p00184900 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin filament protein 0.03 Archaeplastida
AMTR_s00131p00109910 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin filament protein 0.02 Archaeplastida
AT1G49240 ACT8 actin 8 0.02 Archaeplastida
AT5G09810 ACT7 actin 7 0.02 Archaeplastida
AT5G59370 ACT4 actin 4 0.04 Archaeplastida
Cre13.g603700 No alias Cytoskeleton.microfilament network.actin filament protein 0.02 Archaeplastida
Gb_08812 No alias actin filament protein 0.03 Archaeplastida
Gb_11539 No alias actin filament protein 0.03 Archaeplastida
Gb_24792 No alias actin filament protein 0.03 Archaeplastida
LOC_Os01g73310.1 No alias actin filament protein 0.03 Archaeplastida
LOC_Os12g06660.1 No alias actin filament protein 0.03 Archaeplastida
LOC_Os12g44350.1 No alias actin filament protein 0.05 Archaeplastida
MA_135063g0010 No alias actin filament protein 0.03 Archaeplastida
Mp6g10990.1 No alias actin filament protein 0.03 Archaeplastida
Mp6g11010.1 No alias actin filament protein 0.04 Archaeplastida
Solyc04g071260.3.1 No alias actin filament protein 0.08 Archaeplastida
Solyc05g054480.3.1 No alias actin filament protein 0.03 Archaeplastida
Solyc10g080500.2.1 No alias actin filament protein 0.02 Archaeplastida
Zm00001e006282_P001 No alias actin filament protein 0.02 Archaeplastida
Zm00001e012560_P001 No alias actin filament protein 0.02 Archaeplastida
Zm00001e027663_P005 No alias actin filament protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!