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  5. LOC_Os03g62790.1

LOC_Os03g62790.1


Description : Pirin-like protein OS=Solanum lycopersicum (sp|q9see4|pirl_sollc : 467.0)


Gene families : OG0001830 (Archaeplastida) Phylogenetic Tree(s): OG0001830_tree ,
OG_05_0002011 (LandPlants) Phylogenetic Tree(s): OG_05_0002011_tree ,
OG_06_0001651 (SeedPlants) Phylogenetic Tree(s): OG_06_0001651_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g62790.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00186610 evm_27.TU.AmTr_v1... Pirin-like protein OS=Solanum lycopersicum 0.04 Archaeplastida
AT3G59220 PRN, PRN1, ATPIRIN1 pirin 0.02 Archaeplastida
GSVIVT01031671001 No alias Pirin-like protein OS=Solanum lycopersicum 0.06 Archaeplastida
Gb_07514 No alias Pirin-like protein OS=Solanum lycopersicum... 0.07 Archaeplastida
MA_10061g0010 No alias Pirin-like protein OS=Solanum lycopersicum... 0.03 Archaeplastida
Zm00001e034512_P001 No alias Pirin-like protein At1g50590 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR008778 Pirin_C_dom 276 381
IPR003829 Pirin_N_dom 129 223
No external refs found!