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  5. AMTR_s00004p00151900

AMTR_s00004p00151900 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00004.159

No description available


Gene families : OG0001049 (Archaeplastida) Phylogenetic Tree(s): OG0001049_tree ,
OG_05_0000638 (LandPlants) Phylogenetic Tree(s): OG_05_0000638_tree ,
OG_06_0000521 (SeedPlants) Phylogenetic Tree(s): OG_06_0000521_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00151900
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT1G21326 No alias VQ motif-containing protein 0.04 Archaeplastida
AT1G68450 No alias VQ motif-containing protein 0.04 Archaeplastida
Gb_01280 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_01318 No alias no hits & (original description: none) 0.08 Archaeplastida
Gb_08510 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_08522 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g40090.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g01260.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_136956g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_3039395g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_317457g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6029g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_838428g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_87081g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e011491_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e037399_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR008889 VQ 59 85
No external refs found!