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  5. LOC_Os03g64360.1

LOC_Os03g64360.1


Description : F-box protein At4g00755 OS=Arabidopsis thaliana (sp|q8lg03|fb345_arath : 207.0)


Gene families : OG0002449 (Archaeplastida) Phylogenetic Tree(s): OG0002449_tree ,
OG_05_0002588 (LandPlants) Phylogenetic Tree(s): OG_05_0002588_tree ,
OG_06_0002480 (SeedPlants) Phylogenetic Tree(s): OG_06_0002480_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g64360.1
Cluster HCCA: Cluster_360

Target Alias Description ECC score Gene Family Method Actions
Solyc01g091720.3.1 No alias F-box protein At4g00755 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0043545 molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044599 AP-5 adaptor complex IEP Neighborhood
BP GO:0051189 prosthetic group metabolic process IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!