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  5. LOC_Os04g01840.1

LOC_Os04g01840.1


Description : no hits & (original description: none)


Gene families : OG0000686 (Archaeplastida) Phylogenetic Tree(s): OG0000686_tree ,
OG_05_0000403 (LandPlants) Phylogenetic Tree(s): OG_05_0000403_tree ,
OG_06_0000181 (SeedPlants) Phylogenetic Tree(s): OG_06_0000181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g01840.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g20150.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g63740.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g08390.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g29950.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os02g45020.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os03g37630.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g62460.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g03030.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g05590.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g09330.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os04g11950.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g13600.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g14250.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os04g37870.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g49070.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g23770.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g25020.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g48530.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g16010.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g16690.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g23610.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os06g33070.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g36420.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os06g41470.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g49560.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g11520.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os07g22860.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g30550.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g35210.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g42020.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os07g45890.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g05390.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g32810.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os08g33780.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g36260.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g44990.1 No alias no hits & (original description: none) 0.13 Archaeplastida
LOC_Os09g22200.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os10g14260.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g08770.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g27610.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os11g45864.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g11260.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g11880.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g23800.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g28800.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g29250.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os12g39740.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!