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  5. AMTR_s00004p00162550

AMTR_s00004p00162550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00004.178

Description : Coenzyme metabolism.iron-sulfur cluster assembly machineries.mitochondrial ISC system.transfer phase.HSCB chaperone component


Gene families : OG0004909 (Archaeplastida) Phylogenetic Tree(s): OG0004909_tree ,
OG_05_0006339 (LandPlants) Phylogenetic Tree(s): OG_05_0006339_tree ,
OG_06_0005951 (SeedPlants) Phylogenetic Tree(s): OG_06_0005951_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00162550
Cluster HCCA: Cluster_263


Type GO Term Name Evidence Source
BP GO:0051259 protein complex oligomerization IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008479 queuine tRNA-ribosyltransferase activity IEP Neighborhood
BP GO:0008616 queuosine biosynthetic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009163 nucleoside biosynthetic process IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0042455 ribonucleoside biosynthetic process IEP Neighborhood
BP GO:0046116 queuosine metabolic process IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1901659 glycosyl compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR009073 HscB_oligo_C 195 268
IPR001623 DnaJ_domain 111 179
No external refs found!