LOC_Os04g04980.1


Description : ornithine decarboxylase


Gene families : OG0002511 (Archaeplastida) Phylogenetic Tree(s): OG0002511_tree ,
OG_05_0002671 (LandPlants) Phylogenetic Tree(s): OG_05_0002671_tree ,
OG_06_0001701 (SeedPlants) Phylogenetic Tree(s): OG_06_0001701_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g04980.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g37120.1 No alias ornithine decarboxylase 0.03 Archaeplastida
MA_10427924g0010 No alias ornithine decarboxylase 0.04 Archaeplastida
Solyc03g098300.1.1 No alias ornithine decarboxylase 0.02 Archaeplastida
Solyc03g098310.1.1 No alias ornithine decarboxylase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR022643 De-COase2_C 180 275
IPR022644 De-COase2_N 58 169
No external refs found!