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  5. AMTR_s00004p00169140

AMTR_s00004p00169140 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00004.189

Description : Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana


Gene families : OG0003057 (Archaeplastida) Phylogenetic Tree(s): OG0003057_tree ,
OG_05_0002066 (LandPlants) Phylogenetic Tree(s): OG_05_0002066_tree ,
OG_06_0002151 (SeedPlants) Phylogenetic Tree(s): OG_06_0002151_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00169140
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Gb_00760 No alias methylation reader (MBD10-11) 0.01 Archaeplastida
Zm00001e004995_P005 No alias methylation reader (MBD10-11) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 28 89
No external refs found!