1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00004p00176820

AMTR_s00004p00176820 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00004.202

No description available


Gene families : OG0003599 (Archaeplastida) Phylogenetic Tree(s): OG0003599_tree ,
OG_05_0004299 (LandPlants) Phylogenetic Tree(s): OG_05_0004299_tree ,
OG_06_0005021 (SeedPlants) Phylogenetic Tree(s): OG_06_0005021_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00176820
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g06440.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp6g01840.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008175 tRNA methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0008831 dTDP-4-dehydrorhamnose reductase activity IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010038 response to metal ion IEP Neighborhood
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Neighborhood
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0030488 tRNA methylation IEP Neighborhood
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
CC GO:0034708 methyltransferase complex IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
CC GO:0043527 tRNA methyltransferase complex IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
BP GO:0045226 extracellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0046379 extracellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001130 TatD_family 25 317
No external refs found!