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  5. LOC_Os04g10080.1

LOC_Os04g10080.1


Description : no hits & (original description: none)


Gene families : OG0002335 (Archaeplastida) Phylogenetic Tree(s): OG0002335_tree ,
OG_05_0001538 (LandPlants) Phylogenetic Tree(s): OG_05_0001538_tree ,
OG_06_0000823 (SeedPlants) Phylogenetic Tree(s): OG_06_0000823_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g10080.1

Target Alias Description ECC score Gene Family Method Actions
ChrUn.fgenesh.mRNA.4 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os02g24880.1 No alias no hits & (original description: none) 0.19 Archaeplastida
LOC_Os02g25160.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os04g13080.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os05g12540.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os05g17400.1 No alias no hits & (original description: none) 0.31 Archaeplastida
LOC_Os07g15060.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os07g22110.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os07g25480.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g25910.1 No alias no hits & (original description: none) 0.17 Archaeplastida
LOC_Os08g14820.1 No alias no hits & (original description: none) 0.17 Archaeplastida
LOC_Os08g21500.1 No alias no hits & (original description: none) 0.17 Archaeplastida
LOC_Os08g21810.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os09g06360.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os09g16490.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os10g03080.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g15210.1 No alias no hits & (original description: none) 0.14 Archaeplastida
LOC_Os11g22500.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004312 ATHILA_Orf1 16 136
No external refs found!