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  5. LOC_Os04g12390.1

LOC_Os04g12390.1


Description : no hits & (original description: none)


Gene families : OG0000018 (Archaeplastida) Phylogenetic Tree(s): OG0000018_tree ,
OG_05_0000007 (LandPlants) Phylogenetic Tree(s): OG_05_0000007_tree ,
OG_06_0000001 (SeedPlants) Phylogenetic Tree(s): OG_06_0000001_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g12390.1
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g03590.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g18550.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g33630.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g34360.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g38810.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g46330.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g71910.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g74210.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g01420.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g08280.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g16590.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g25520.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g25560.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g49290.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g43280.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g54020.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g60020.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g22840.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g43590.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g44010.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g10230.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g14000.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g16580.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g18570.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g18990.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g26100.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g29820.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g39460.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g10380.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g15850.1 No alias Ethylene receptor 4 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os06g16900.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g21000.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g21150.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g35350.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g42500.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g42580.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g03350.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g11430.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g17510.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g32750.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g34090.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g46120.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g03730.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g04870.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g08950.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os08g12280.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g17120.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g21140.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g26280.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os09g07330.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os09g09060.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g14260.1 No alias Glutathione S-transferase T3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os09g16890.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os10g07554.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g08360.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g08370.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g10770.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os10g11230.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g29010.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os10g33480.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g03950.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g14350.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g19550.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g23810.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g24870.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g35762.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g40960.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g01640.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g11600.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g13080.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g14820.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g16400.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g16790.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g23240.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g24680.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g25300.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g26070.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g28350.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g33620.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g36480.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g37240.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004061 arylformamidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006569 tryptophan catabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009074 aromatic amino acid family catabolic process IEP Neighborhood
BP GO:0009310 amine catabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019441 tryptophan catabolic process to kynurenine IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042180 cellular ketone metabolic process IEP Neighborhood
BP GO:0042402 cellular biogenic amine catabolic process IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0042436 indole-containing compound catabolic process IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046218 indolalkylamine catabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0070189 kynurenine metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 848 961
IPR001229 Jacalin-like_lectin_dom 1019 1144
No external refs found!