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  5. LOC_Os04g13140.1

LOC_Os04g13140.1


Description : protease (Papain)


Gene families : OG0000108 (Archaeplastida) Phylogenetic Tree(s): OG0000108_tree ,
OG_05_0000044 (LandPlants) Phylogenetic Tree(s): OG_05_0000044_tree ,
OG_06_0000374 (SeedPlants) Phylogenetic Tree(s): OG_06_0000374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g13140.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00214890 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.05 Archaeplastida
AMTR_s00061p00215070 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.06 Archaeplastida
AMTR_s00061p00215230 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
AMTR_s00061p00215400 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
AMTR_s00061p00215500 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 Archaeplastida
AMTR_s00061p00215860 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s01332p00008900 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.04 Archaeplastida
AT1G47128 RD21, RD21A Granulin repeat cysteine protease family protein 0.03 Archaeplastida
AT2G22160 No alias Cysteine proteinases superfamily protein 0.02 Archaeplastida
AT3G48350 No alias Cysteine proteinases superfamily protein 0.03 Archaeplastida
AT3G49340 No alias Cysteine proteinases superfamily protein 0.03 Archaeplastida
Gb_17130 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.02 Archaeplastida
Gb_34744 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g67980.1 No alias protease (Papain) 0.03 Archaeplastida
LOC_Os03g54130.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.05 Archaeplastida
LOC_Os04g12660.1 No alias Senescence-specific cysteine protease SAG39 OS=Oryza... 0.05 Archaeplastida
LOC_Os04g13090.1 No alias protease (Papain) 0.05 Archaeplastida
LOC_Os04g14740.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g43230.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g44270.1 No alias protease (Papain) 0.04 Archaeplastida
LOC_Os12g17540.1 No alias protease (Papain) 0.05 Archaeplastida
MA_10425982g0010 No alias Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10429635g0010 No alias Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_36514g0010 No alias Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 Archaeplastida
MA_9371025g0010 No alias Thiol protease SEN102 OS=Hemerocallis sp.... 0.02 Archaeplastida
Solyc02g076980.5.1.1 No alias Senescence-specific cysteine protease SAG12... 0.04 Archaeplastida
Solyc02g077040.4.1 No alias Senescence-specific cysteine protease SAG12... 0.03 Archaeplastida
Solyc03g111730.3.1 No alias protease (Papain) 0.02 Archaeplastida
Solyc04g078540.4.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc12g094700.3.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.04 Archaeplastida
Zm00001e003949_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e006743_P002 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e010091_P001 No alias Senescence-specific cysteine protease SAG12... 0.02 Archaeplastida
Zm00001e021376_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e021469_P001 No alias Senescence-specific cysteine protease SAG39 OS=Oryza... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013201 Prot_inhib_I29 40 98
IPR000668 Peptidase_C1A_C 129 348
No external refs found!