Description : component psRPS8 of small ribosomal subunit proteome
Gene families : OG0008585 (Archaeplastida) Phylogenetic Tree(s): OG0008585_tree ,
OG_05_0010054 (LandPlants) Phylogenetic Tree(s): OG_05_0010054_tree ,
OG_06_0012240 (SeedPlants) Phylogenetic Tree(s): OG_06_0012240_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os04g16832.1 | |
Cluster | HCCA: Cluster_125 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
ATCG00770 | RPS8 | ribosomal protein S8 | 0.32 | Archaeplastida | |
GSVIVT01014320001 | No alias | 30S ribosomal protein S8, chloroplastic OS=Vitis vinifera | 0.05 | Archaeplastida | |
MA_94412g0020 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Mpzg00740.1 | No alias | component psRPS8 of small ribosomal subunit proteome | 0.08 | Archaeplastida | |
Smo137784 | No alias | Protein biosynthesis.organelle translation... | 0.02 | Archaeplastida | |
Solyc00g500031.1.1 | No alias | component psRPL14 of large ribosomal subunit proteome.... | 0.24 | Archaeplastida | |
Solyc00g500076.1.1 | No alias | component psRPL14 of large ribosomal subunit proteome.... | 0.24 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
MF | GO:0003954 | NADH dehydrogenase activity | IEP | Neighborhood |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
BP | GO:0006413 | translational initiation | IEP | Neighborhood |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Neighborhood |
MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
MF | GO:0046983 | protein dimerization activity | IEP | Neighborhood |
MF | GO:0048038 | quinone binding | IEP | Neighborhood |
MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | Neighborhood |
MF | GO:0051287 | NAD binding | IEP | Neighborhood |
BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000630 | Ribosomal_S8 | 4 | 136 |
No external refs found! |