Description : linker histone (H1)
Gene families : OG0000491 (Archaeplastida) Phylogenetic Tree(s): OG0000491_tree ,
OG_05_0000417 (LandPlants) Phylogenetic Tree(s): OG_05_0000417_tree ,
OG_06_0000288 (SeedPlants) Phylogenetic Tree(s): OG_06_0000288_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os04g18090.1 | |
Cluster | HCCA: Cluster_184 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00264270 | evm_27.TU.AmTr_v1... | Chromatin organisation.histones.H1 linker histone | 0.07 | Archaeplastida | |
AMTR_s00057p00112340 | evm_27.TU.AmTr_v1... | Chromatin organisation.histones.H1 linker histone | 0.06 | Archaeplastida | |
AMTR_s00185p00055680 | evm_27.TU.AmTr_v1... | Chromatin organisation.histones.H1 linker histone | 0.03 | Archaeplastida | |
AT1G06760 | No alias | winged-helix DNA-binding transcription factor family protein | 0.22 | Archaeplastida | |
AT2G30620 | No alias | winged-helix DNA-binding transcription factor family protein | 0.11 | Archaeplastida | |
Cpa|evm.model.tig00020780.71 | No alias | No description available | 0.01 | Archaeplastida | |
Cre13.g567450 | No alias | Chromatin organisation.histones.H1 linker histone | 0.33 | Archaeplastida | |
GSVIVT01028074001 | No alias | Chromatin organisation.histones.H1 linker histone | 0.09 | Archaeplastida | |
Gb_02738 | No alias | linker histone (H1) | 0.33 | Archaeplastida | |
Gb_03348 | No alias | linker histone (H1) | 0.17 | Archaeplastida | |
MA_102457g0010 | No alias | linker histone (H1) | 0.13 | Archaeplastida | |
MA_10428525g0020 | No alias | linker histone (H1) | 0.05 | Archaeplastida | |
MA_10436125g0010 | No alias | linker histone (H1) | 0.05 | Archaeplastida | |
MA_10436125g0020 | No alias | linker histone (H1) | 0.06 | Archaeplastida | |
MA_11137g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
MA_11231g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
MA_500183g0010 | No alias | linker histone (H1) | 0.17 | Archaeplastida | |
MA_5293931g0010 | No alias | No annotation | 0.07 | Archaeplastida | |
MA_6021364g0010 | No alias | linker histone (H1) | 0.14 | Archaeplastida | |
MA_6251451g0010 | No alias | No annotation | 0.07 | Archaeplastida | |
Mp6g03150.1 | No alias | linker histone (H1) | 0.23 | Archaeplastida | |
Pp3c18_14270V3.1 | No alias | winged-helix DNA-binding transcription factor family protein | 0.02 | Archaeplastida | |
Pp3c18_19330V3.1 | No alias | winged-helix DNA-binding transcription factor family protein | 0.08 | Archaeplastida | |
Solyc09g066100.3.1 | No alias | linker histone (H1) | 0.15 | Archaeplastida | |
Solyc09g083380.4.1 | No alias | linker histone (H1) | 0.24 | Archaeplastida | |
Zm00001e006018_P006 | No alias | linker histone (H1) | 0.08 | Archaeplastida | |
Zm00001e007189_P001 | No alias | linker histone (H1) | 0.24 | Archaeplastida | |
Zm00001e011857_P001 | No alias | linker histone (H1) | 0.08 | Archaeplastida | |
Zm00001e011859_P001 | No alias | linker histone (H1) | 0.22 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | Interproscan |
MF | GO:0003677 | DNA binding | IEA | Interproscan |
BP | GO:0006334 | nucleosome assembly | IEA | Interproscan |
CC | GO:0042025 | host cell nucleus | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0042393 | histone binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005818 | Histone_H1/H5_H15 | 34 | 101 |
No external refs found! |