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  5. AMTR_s00004p00260860

AMTR_s00004p00260860 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00004.254

No description available


Gene families : OG0000400 (Archaeplastida) Phylogenetic Tree(s): OG0000400_tree ,
OG_05_0000199 (LandPlants) Phylogenetic Tree(s): OG_05_0000199_tree ,
OG_06_0000082 (SeedPlants) Phylogenetic Tree(s): OG_06_0000082_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00260860
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00110250 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00008p00259640 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00015p00058540 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00020p00124950 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00020p00202690 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00026p00224150 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00026p00231290 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00028p00151390 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00031p00138370 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00031p00150150 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00034p00047290 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00034p00129610 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00035p00152570 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00051p00177730 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00055p00086220 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00070p00090640 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00070p00090890 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00073p00196130 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00084p00075840 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00093p00160790 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00113p00028110 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AMTR_s00144p00028290 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00157p00019390 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00165p00071670 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR019557 AminoTfrase-like_pln_mobile 76 208
No external refs found!