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  5. LOC_Os04g20420.1

LOC_Os04g20420.1


Description : no description available(sp|q65xs5|bc10_orysj : 171.0)


Gene families : OG0000189 (Archaeplastida) Phylogenetic Tree(s): OG0000189_tree ,
OG_05_0000499 (LandPlants) Phylogenetic Tree(s): OG_05_0000499_tree ,
OG_06_0000285 (SeedPlants) Phylogenetic Tree(s): OG_06_0000285_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g20420.1
Cluster HCCA: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00191120 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00106p00050320 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT3G21310 No alias Core-2/I-branching... 0.03 Archaeplastida
LOC_Os02g07880.1 No alias no description available(sp|q65xs5|bc10_orysj : 174.0) 0.04 Archaeplastida
Mp4g14550.1 No alias no description available(sp|q65xs5|bc10_orysj : 182.0) 0.02 Archaeplastida
Pp3c11_17210V3.1 No alias Core-2/I-branching... 0.02 Archaeplastida
Solyc03g119260.4.1 No alias no description available(sp|q65xs5|bc10_orysj : 145.0) 0.04 Archaeplastida
Solyc07g008940.3.1 No alias no description available(sp|q65xs5|bc10_orysj : 186.0) 0.03 Archaeplastida
Solyc12g036400.1.1 No alias no description available(sp|q65xs5|bc10_orysj : 169.0) 0.03 Archaeplastida
Zm00001e040053_P001 No alias no description available(sp|q65xs5|bc10_orysj : 165.0) 0.03 Archaeplastida
Zm00001e042023_P001 No alias no description available(sp|q65xs5|bc10_orysj : 163.0) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 144 371
No external refs found!