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  5. LOC_Os04g21320.1

LOC_Os04g21320.1


Description : CASP-like protein 2A1 OS=Oryza sativa subsp. indica (sp|b8arw3|cspla_orysi : 350.0)


Gene families : OG0004217 (Archaeplastida) Phylogenetic Tree(s): OG0004217_tree ,
OG_05_0002923 (LandPlants) Phylogenetic Tree(s): OG_05_0002923_tree ,
OG_06_0004743 (SeedPlants) Phylogenetic Tree(s): OG_06_0004743_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g21320.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT3G14380 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
MA_37849g0010 No alias CASP-like protein 2A1 OS=Picea sitchensis... 0.02 Archaeplastida
Solyc10g007660.3.1 No alias CASP-like protein 2A1 OS=Vitis vinifera... 0.04 Archaeplastida
Zm00001e014468_P001 No alias CASP-like protein 2D1 OS=Zea mays (sp|b6tuw9|csplc_maize : 245.0) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006702 CASP_dom 35 174
No external refs found!