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  5. AMTR_s00004p00263150

AMTR_s00004p00263150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00004.263

Description : Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana


Gene families : OG0000045 (Archaeplastida) Phylogenetic Tree(s): OG0000045_tree ,
OG_05_0041460 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0035917 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00263150
Cluster HCCA: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00213790 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.4... 0.04 Archaeplastida
AMTR_s00065p00199270 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.4... 0.03 Archaeplastida
AMTR_s00065p00199520 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.4... 0.03 Archaeplastida
MA_14679g0010 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.02 Archaeplastida
Solyc07g006850.3.1 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.02 Archaeplastida
Solyc07g055990.3.1 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.02 Archaeplastida
Solyc10g005350.3.1 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.04 Archaeplastida
Zm00001e002475_P001 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000757 GH16 16 72
No external refs found!