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  5. AMTR_s00004p00267270

AMTR_s00004p00267270 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00004.267

No description available


Gene families : OG0004940 (Archaeplastida) Phylogenetic Tree(s): OG0004940_tree ,
OG_05_0041461 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0035918 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00267270
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AT5G24350 No alias CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39... 0.04 Archaeplastida
Cpa|evm.model.tig00000076.139 No alias Vesicle trafficking.target membrane tethering.DSL1... 0.01 Archaeplastida
Cre09.g415400 No alias Vesicle trafficking.target membrane tethering.DSL1... 0.02 Archaeplastida
GSVIVT01038603001 No alias Vesicle trafficking.target membrane tethering.DSL1... 0.05 Archaeplastida
Gb_24496 No alias component MIP2 of DSL1 (Depends-on-SLY1) complex 0.02 Archaeplastida
MA_10437135g0010 No alias component MIP2 of DSL1 (Depends-on-SLY1) complex 0.04 Archaeplastida
MA_37482g0010 No alias component MIP2 of DSL1 (Depends-on-SLY1) complex 0.06 Archaeplastida
Solyc03g082680.4.1 No alias component MIP2 of DSL1 (Depends-on-SLY1) complex 0.02 Archaeplastida
Zm00001e027951_P001 No alias component MIP2 of DSL1 (Depends-on-SLY1) complex 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!