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  5. LOC_Os04g23250.1

LOC_Os04g23250.1


Description : no hits & (original description: none)


Gene families : OG0000018 (Archaeplastida) Phylogenetic Tree(s): OG0000018_tree ,
OG_05_0000007 (LandPlants) Phylogenetic Tree(s): OG_05_0000007_tree ,
OG_06_0000001 (SeedPlants) Phylogenetic Tree(s): OG_06_0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g23250.1
Cluster HCCA: Cluster_510

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g04140.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g18260.1 No alias no hits & (original description: none) 0.17 Archaeplastida
LOC_Os01g20190.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g36766.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os02g25560.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os02g37730.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os03g27520.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g27860.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g54020.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g22840.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g25590.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g14000.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g14460.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g39460.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g10380.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g42580.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g03350.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g09540.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os07g30750.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g12280.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g16080.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g01900.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os09g09150.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g11060.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os10g16800.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os11g23810.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os11g31180.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g01640.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g11600.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os12g22910.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g24680.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g26070.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g28740.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g37240.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 736 841
No external refs found!