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  5. LOC_Os04g27410.1

LOC_Os04g27410.1


Description : transcription factor (MYB-related)


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0078146 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0066921 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g27410.1

Target Alias Description ECC score Gene Family Method Actions
AT3G10590 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
AT5G47390 No alias myb-like transcription factor family protein 0.05 Archaeplastida
AT5G58900 No alias Homeodomain-like transcriptional regulator 0.04 Archaeplastida
Gb_15334 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Gb_38078 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os01g09640.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os05g37040.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os05g37730.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_10432538g0010 No alias transcription factor (MYB-related) 0.05 Archaeplastida
MA_16729g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_41041g0010 No alias transcription factor (MYB-related) 0.04 Archaeplastida
MA_413315g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_4540441g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_957399g0010 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Mp5g11830.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Pp3c15_23090V3.1 No alias myb-like transcription factor family protein 0.02 Archaeplastida
Pp3c4_5410V3.1 No alias myb-like transcription factor family protein 0.02 Archaeplastida
Smo133546 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc03g096350.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc04g008870.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e031738_P001 No alias transcription factor (MYB-related) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 174 218
No external refs found!