LOC_Os04g27860.1


Description : component RPS27 of SSU proteome


Gene families : OG0001943 (Archaeplastida) Phylogenetic Tree(s): OG0001943_tree ,
OG_05_0003066 (LandPlants) Phylogenetic Tree(s): OG_05_0003066_tree ,
OG_06_0004957 (SeedPlants) Phylogenetic Tree(s): OG_06_0004957_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g27860.1
Cluster HCCA: Cluster_333

Target Alias Description ECC score Gene Family Method Actions
AT3G61110 ARS27A, RS27A ribosomal protein S27 0.05 Archaeplastida
AT5G47930 No alias Zinc-binding ribosomal protein family protein 0.05 Archaeplastida
Cre12.g529400 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
GSVIVT01001113001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
GSVIVT01032964001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
MA_54625g0010 No alias component RPS27 of SSU proteome 0.02 Archaeplastida
Pp3c18_2100V3.1 No alias ribosomal protein S27 0.02 Archaeplastida
Pp3c1_15840V3.1 No alias ribosomal protein S27 0.07 Archaeplastida
Pp3c21_21540V3.1 No alias ribosomal protein S27 0.03 Archaeplastida
Pp3c22_18310V3.1 No alias ribosomal protein S27 0.03 Archaeplastida
Pp3c2_20540V3.1 No alias ribosomal protein S27 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0008535 respiratory chain complex IV assembly IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Neighborhood
BP GO:0033617 mitochondrial respiratory chain complex IV assembly IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
InterPro domains Description Start Stop
IPR000592 Ribosomal_S27e 30 84
No external refs found!