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  5. LOC_Os04g30770.1

LOC_Os04g30770.1


Description : no description available(sp|a0a072ur65|cht5b_medtr : 146.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 96.2)


Gene families : OG0000905 (Archaeplastida) Phylogenetic Tree(s): OG0000905_tree ,
OG_05_0000646 (LandPlants) Phylogenetic Tree(s): OG_05_0000646_tree ,
OG_06_0000436 (SeedPlants) Phylogenetic Tree(s): OG_06_0000436_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g30770.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT4G19720 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.03 Archaeplastida
AT4G19820 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.03 Archaeplastida
Gb_00910 No alias Class V chitinase OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_10730 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g27400.1 No alias no description available(sp|u5n4e3|nfh1_medtr : 191.0) &... 0.04 Archaeplastida
Pp3c16_1070V3.1 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 44 389
No external refs found!