1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g31610.1

LOC_Os04g31610.1


Description : F-box protein At1g67340 OS=Arabidopsis thaliana (sp|q9fyf9|fb76_arath : 283.0)


Gene families : OG0001026 (Archaeplastida) Phylogenetic Tree(s): OG0001026_tree ,
OG_05_0000958 (LandPlants) Phylogenetic Tree(s): OG_05_0000958_tree ,
OG_06_0001615 (SeedPlants) Phylogenetic Tree(s): OG_06_0001615_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g31610.1
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
MA_6399g0010 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Smo171141 No alias F-box protein At1g67340 OS=Arabidopsis thaliana 0.03 Archaeplastida
Zm00001e008387_P001 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e018821_P001 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e021441_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002893 Znf_MYND 328 368
No external refs found!