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  5. LOC_Os04g31940.1

LOC_Os04g31940.1


Description : no hits & (original description: none)


Gene families : OG0000255 (Archaeplastida) Phylogenetic Tree(s): OG0000255_tree ,
OG_05_0000197 (LandPlants) Phylogenetic Tree(s): OG_05_0000197_tree ,
OG_06_0000631 (SeedPlants) Phylogenetic Tree(s): OG_06_0000631_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g31940.1
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
AT2G05230 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 Archaeplastida
AT2G05250 No alias DNAJ heat shock N-terminal domain-containing protein 0.03 Archaeplastida
AT3G06340 No alias DNAJ heat shock N-terminal domain-containing protein 0.06 Archaeplastida
GSVIVT01008568001 No alias No description available 0.07 Archaeplastida
GSVIVT01017824001 No alias No description available 0.05 Archaeplastida
GSVIVT01028708001 No alias No description available 0.03 Archaeplastida
Gb_00839 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_17193 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g28310.1 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_10434613g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10434613g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_137848g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g27530.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c17_2560V3.1 No alias DNAJ heat shock N-terminal domain-containing protein 0.05 Archaeplastida
Solyc03g007280.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc03g019640.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc05g040050.3.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc07g047690.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc08g029220.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e017660_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e024442_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e025632_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e025633_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e040755_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e041002_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e041003_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017070 U6 snRNA binding IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0030623 U5 snRNA binding IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 62 123
IPR024593 DUF3444 486 692
No external refs found!