1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g32460.1

LOC_Os04g32460.1


Description : component TIR1/AFB of auxin receptor complex. component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000271 (Archaeplastida) Phylogenetic Tree(s): OG0000271_tree ,
OG_05_0000806 (LandPlants) Phylogenetic Tree(s): OG_05_0000806_tree ,
OG_06_0000796 (SeedPlants) Phylogenetic Tree(s): OG_06_0000796_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g32460.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g63420.1 No alias component COI of jasmonic acid receptor complex 0.04 Archaeplastida
MA_15842g0020 No alias Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c23_18960V3.1 No alias RNI-like superfamily protein 0.02 Archaeplastida
Pp3c9_10120V3.1 No alias RNI-like superfamily protein 0.02 Archaeplastida
Solyc09g074520.3.1 No alias component TIR1/AFB of auxin receptor complex. component... 0.02 Archaeplastida
Zm00001e000649_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.05 Archaeplastida
Zm00001e015908_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.08 Archaeplastida
Zm00001e027505_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.05 Archaeplastida
Zm00001e038839_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!