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  5. LOC_Os04g33820.1

LOC_Os04g33820.1


Description : Probable F-box protein At2g36090 OS=Arabidopsis thaliana (sp|q9sih5|fb322_arath : 136.0)


Gene families : OG0001951 (Archaeplastida) Phylogenetic Tree(s): OG0001951_tree ,
OG_05_0001385 (LandPlants) Phylogenetic Tree(s): OG_05_0001385_tree ,
OG_06_0004269 (SeedPlants) Phylogenetic Tree(s): OG_06_0004269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g33820.1
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00055630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00114p00120290 evm_27.TU.AmTr_v1... Probable F-box protein At2g36090 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os03g24230.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g05660.1 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g06030.1 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Pp3c23_16130V3.1 No alias F-box family protein 0.04 Archaeplastida
Pp3c23_3650V3.1 No alias F-box family protein 0.02 Archaeplastida
Solyc10g083230.1.1 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e014737_P001 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!